geneplast.data
This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see geneplast.data.
Input data for the geneplast package via AnnotationHub
Bioconductor version: 3.13
The package geneplast.data provides an interface for obtaining input data used in the analyses pipelines from geneplast package. Objects containing species, phylogenetic trees, and orthology information of eukaryotes from different orthologous databases are provided.
Author: Leonardo Campos [aut, cre], Danilo Imparato [aut], Rodrigo Dalmolin [aut], Mauro Castro [aut]
Maintainer: Leonardo Campos <leofields at gmail.com>
citation("geneplast.data")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("geneplast.data")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("geneplast.data")| Supporting data for geneplast evolutionary analyses | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | AnnotationData, AnnotationHub |
| Version | 0.99.2 |
| License | Artistic-2.0 |
| Depends | R (>= 4.0) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | geneplast.data_0.99.2.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Package Short Url | https://bioconductor.org/packages/geneplast.data/ |
| Package Downloads Report | Download Stats |