erma

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see erma.

epigenomic road map adventures


Bioconductor version: 3.13

Software and data to support epigenomic road map adventures.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("erma")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("erma")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("erma")
ermaInteractive HTML R Script
Reference Manual PDF

Details

biocViews Software
Version 1.8.0
In Bioconductor since BioC 3.2 (R-3.2) (8.5 years)
License Artistic-2.0
Depends R (>= 3.1), methods, Homo.sapiens, GenomicFiles(>= 1.5.2)
Imports rtracklayer(>= 1.38.1), S4Vectors(>= 0.23.18), BiocGenerics, GenomicRanges, SummarizedExperiment, ggplot2, GenomeInfoDb, Biobase, shiny, BiocParallel, IRanges, AnnotationDbi
System Requirements
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Suggests rmarkdown, BiocStyle, knitr, GO.db, png, DT, doParallel
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package erma_1.8.0.tar.gz
Windows Binary erma_1.8.0.zip
macOS 10.13 (High Sierra) erma_1.8.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/erma
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/erma
Bioc Package Browser https://code.bioconductor.org/browse/erma/
Package Short Url https://bioconductor.org/packages/erma/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.13 Source Archive