rqubic
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see rqubic.
Qualitative biclustering algorithm for expression data analysis in R
Bioconductor version: 3.11
This package implements the QUBIC algorithm introduced by Li et al. for the qualitative biclustering with gene expression data.
Author: Jitao David Zhang, with inputs from Laura Badi and Martin Ebeling
Maintainer: Jitao David Zhang <jitao_david.zhang at roche.com>
citation("rqubic")
):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rqubic")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rqubic")
Qualitative Biclustering with Bioconductor Package rqubic | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Clustering, Microarray, Software |
Version | 1.34.0 |
In Bioconductor since | BioC 2.9 (R-2.14) (12.5 years) |
License | GPL-2 |
Depends | |
Imports | methods, Biobase, BiocGenerics, biclust |
System Requirements | |
URL |
See More
Suggests | RColorBrewer |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | miRSM |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | rqubic_1.34.0.tar.gz |
Windows Binary | rqubic_1.34.0.zip (32- & 64-bit) |
macOS 10.13 (High Sierra) | rqubic_1.34.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/rqubic |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rqubic |
Bioc Package Browser | https://code.bioconductor.org/browse/rqubic/ |
Package Short Url | https://bioconductor.org/packages/rqubic/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.11 | Source Archive |