lpsymphony
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see lpsymphony.
Symphony integer linear programming solver in R
Bioconductor version: 3.11
This package was derived from Rsymphony_0.1-17 from CRAN. These packages provide an R interface to SYMPHONY, an open-source linear programming solver written in C++. The main difference between this package and Rsymphony is that it includes the solver source code (SYMPHONY version 5.6), while Rsymphony expects to find header and library files on the users' system. Thus the intention of lpsymphony is to provide an easy to install interface to SYMPHONY. For Windows, precompiled DLLs are included in this package.
Author: Vladislav Kim [aut, cre], Ted Ralphs [ctb], Menal Guzelsoy [ctb], Ashutosh Mahajan [ctb], Reinhard Harter [ctb], Kurt Hornik [ctb], Cyrille Szymanski [ctb], Stefan Theussl [ctb]
Maintainer: Vladislav Kim <Vladislav.Kim at embl.de>
citation("lpsymphony")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("lpsymphony")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("lpsymphony")| Introduction to lpsymphony | R Script | |
| Reference Manual |
Details
| biocViews | Infrastructure, Software, ThirdPartyClient |
| Version | 1.16.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (8 years) |
| License | EPL |
| Depends | R (>= 3.0.0) |
| Imports | |
| System Requirements | GNU make |
| URL | http://R-Forge.R-project.org/projects/rsymphony https://projects.coin-or.org/SYMPHONY http://www.coin-or.org/download/source/SYMPHONY/ |
See More
| Suggests | BiocStyle, knitr, testthat |
| Linking To | |
| Enhances | slam |
| Depends On Me | |
| Imports Me | IHW, Maaslin2 |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | lpsymphony_1.16.0.tar.gz |
| Windows Binary | lpsymphony_1.16.0.zip (32- & 64-bit) |
| macOS 10.13 (High Sierra) | lpsymphony_1.16.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/lpsymphony |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/lpsymphony |
| Bioc Package Browser | https://code.bioconductor.org/browse/lpsymphony/ |
| Package Short Url | https://bioconductor.org/packages/lpsymphony/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.11 | Source Archive |