cleaver
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see cleaver.
Cleavage of Polypeptide Sequences
Bioconductor version: 3.11
In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html
Author: Sebastian Gibb [aut, cre]
Maintainer: Sebastian Gibb <mail at sebastiangibb.de>
Citation (from within R, enter
citation("cleaver")
):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("cleaver")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cleaver")
In-silico cleavage of polypeptides | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Proteomics, Software |
Version | 1.26.1 |
In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
License | GPL (>= 3) |
Depends | R (>= 3.0.0), methods, Biostrings(>= 1.29.8) |
Imports | S4Vectors, IRanges |
System Requirements | |
URL | https://github.com/sgibb/cleaver/ |
Bug Reports | https://github.com/sgibb/cleaver/issues/ |
See More
Suggests | testthat (>= 0.8), knitr, BiocStyle(>= 0.0.14), rmarkdown, BRAIN, UniProt.ws(>= 2.1.4) |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | synapter |
Suggests Me | RforProteomics |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | cleaver_1.26.1.tar.gz |
Windows Binary | cleaver_1.26.1.zip |
macOS 10.13 (High Sierra) | cleaver_1.26.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/cleaver |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/cleaver |
Bioc Package Browser | https://code.bioconductor.org/browse/cleaver/ |
Package Short Url | https://bioconductor.org/packages/cleaver/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.11 | Source Archive |