basilisk
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see basilisk.
Freezing Python Versions Inside Bioconductor Packages
Bioconductor version: 3.11
Installs a self-contained Python instance that is managed by the R installation. This aims to provide a consistent Python version that can be used reliably by Bioconductor packages. Module versions are also controlled to guarantee consistent behavior on different user systems.
Author: Aaron Lun [aut, cre, cph], Vince Carey [ctb]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>
citation("basilisk")
):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("basilisk")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("basilisk")
Motivation | HTML | R Script |
Reference Manual |
Details
biocViews | Infrastructure, Software |
Version | 1.0.2 |
In Bioconductor since | BioC 3.11 (R-4.0) (4 years) |
License | GPL-3 |
Depends | |
Imports | reticulate, parallel, methods, basilisk.utils |
System Requirements | |
URL |
See More
Suggests | knitr, rmarkdown, BiocStyle, testthat, callr |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | BiocSklearn |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | basilisk_1.0.2.tar.gz |
Windows Binary | basilisk_1.0.2.zip |
macOS 10.13 (High Sierra) | basilisk_1.0.2.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/basilisk |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/basilisk |
Bioc Package Browser | https://code.bioconductor.org/browse/basilisk/ |
Package Short Url | https://bioconductor.org/packages/basilisk/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.11 | Source Archive |