NeighborNet

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see NeighborNet.

Neighbor_net analysis


Bioconductor version: 3.11

Identify the putative mechanism explaining the active interactions between genes in the investigated phenotype.

Author: Sahar Ansari <saharansari at wayne.edu> and Sorin Draghici <sorin at wayne.edu>

Maintainer: Sahar Ansari <saharansari at wayne.edu>

Citation (from within R, enter citation("NeighborNet")):

Installation

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("NeighborNet")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NeighborNet")
NeighborNet PDF R Script
Reference Manual PDF

Details

biocViews GeneExpression, GraphAndNetwork, Software, StatisticalMethod
Version 1.6.0
In Bioconductor since BioC 3.8 (R-3.5) (5.5 years)
License CC BY-NC-ND 4.0
Depends methods
Imports graph, stats
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package NeighborNet_1.6.0.tar.gz
Windows Binary NeighborNet_1.6.0.zip
macOS 10.13 (High Sierra) NeighborNet_1.6.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/NeighborNet
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/NeighborNet
Bioc Package Browser https://code.bioconductor.org/browse/NeighborNet/
Package Short Url https://bioconductor.org/packages/NeighborNet/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.11 Source Archive