public class AtomData
extends java.lang.Object
Modifier and Type | Field and Description |
---|---|
int |
ac |
int |
adpMode |
int[] |
atomicNumber |
int[] |
atomIndex |
int[] |
atomMolecule |
float[] |
atomRadius |
Atom[] |
atoms |
javajs.util.BS |
bsIgnored |
javajs.util.BS[] |
bsMolecules |
javajs.util.BS |
bsSelected |
java.lang.String |
fileName |
int |
firstAtomIndex |
int |
firstModelIndex |
float |
hAtomRadius |
javajs.util.P3[][] |
hAtoms |
int |
hydrogenAtomCount |
int |
lastModelIndex |
static int |
MODE_FILL_COORDS |
static int |
MODE_FILL_MODEL |
static int |
MODE_FILL_MOLECULES |
static int |
MODE_FILL_MULTIMODEL |
static int |
MODE_FILL_RADII |
static int |
MODE_GET_ATTACHED_HYDROGENS |
int |
modelIndex |
java.lang.String |
modelName |
java.lang.String |
programInfo |
RadiusData |
radiusData |
javajs.util.P3[] |
xyz |
Constructor and Description |
---|
AtomData() |
Modifier and Type | Method and Description |
---|---|
void |
transformXYZ(javajs.util.M4 mat,
javajs.util.BS bs)
allow for transformed XYZ
|
public static final int MODE_FILL_MODEL
public static final int MODE_FILL_COORDS
public static final int MODE_FILL_RADII
public static final int MODE_FILL_MOLECULES
public static final int MODE_GET_ATTACHED_HYDROGENS
public static final int MODE_FILL_MULTIMODEL
public java.lang.String programInfo
public java.lang.String fileName
public java.lang.String modelName
public int modelIndex
public javajs.util.BS bsSelected
public javajs.util.BS bsIgnored
public javajs.util.BS[] bsMolecules
public RadiusData radiusData
public int firstAtomIndex
public int firstModelIndex
public int lastModelIndex
public float hAtomRadius
public int[] atomIndex
public Atom[] atoms
public javajs.util.P3[] xyz
public float[] atomRadius
public int[] atomicNumber
public int[] atomMolecule
public javajs.util.P3[][] hAtoms
public int ac
public int hydrogenAtomCount
public int adpMode