mrcImage1dShiftAverageByAnnealing
Usage
Usage: mrcImage1dShiftAverageByAnnealing
Options:
[-i[nput] In (NULL ).as(inFile ) ] :Essential :InputDataFile
[-s[ignal position] Signal (NULL ).as(inFile ) ] :Essential :File to define position of signal
[-o[utput] Out (NULL ).as(outFile ) ] :Essential :OutputDataFile
[-r[ange] range (0 ).as(Integer ) ] :Optional :Search range of shift.Default:Nx
[-d[elta] delta (1.0 ).as(Real ) ] :Optional :Spacing of molecule(Pixel).
[-T[eperature] temperature (1.0 ).as(Real ) ] :Optional :Initial temperature.
[-iter[ation] iter (1000 ).as(Integer ) ] :Optional :Number of iteration before reducing temperature.
[-eps[ilon] eps (0.001 ).as(Real ) ] :Optional :Temperature(T) reduced to (1-epsilon)T.
[-tol tol (1e-2 ).as(Real ) ] :Optional :Number to identify convergence
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
[-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode
[-M[ode2] mode2 (0 ).as(Integer ) ] :Optional :Mode2
----- mode -----
0:All search
1:annealing method
2:mode 1 and refine by powel.
3:mode 1 and refine by annealing.
----- mode2 -----
0:by amplitude
1:by power
2:by amplitude using only phase
3:by power using only phase
4:by amplitude using S/sqrt(S)
5:by power using only S/sqrt(S)