mrcImageShapeSearch
Usage
Usage: mrcImageShapeSearch
Options:
[-i[nput] In (NULL ).as(inFile::mrcImage ) ] :Essential :Input
[-o[utput] Out (NULL ).as(outFile::mrcImage ) ] :Essential :Output
[-Shape Shape (NULL ).as(outFile::mrcImage ) ] :Optional :Output
[-n[Cube] nCube (0 ).as(Integer ) ] :Optional :Mode
[-Refine ] :Optional :Refine
[-r[adius] minR (3 ).as(Integer )
maxR (5 ).as(Integer )
delR (1 ).as(Integer ) ] :Optional :Radius[pixel]
[-l[ength] minL (3 ).as(Integer )
maxL (5 ).as(Integer )
delL (1 ).as(Integer ) ] :Optional :Length[pixel]
[-Phi minPhi (0.0 ).as(Real )
maxPhi (359.0 ).as(Real )
delPhi (45.0 ).as(Real ) ] :Optional :around z-axis[degree]
[-Theta minTheta (0.0 ).as(Real )
maxTheta (359.0 ).as(Real )
delTheta (45.0 ).as(Real ) ] :Optional :around x-axis[degree]
[-Psi minPsi (0.0 ).as(Real )
maxPsi (350.0 ).as(Real )
delPsi (45.0 ).as(Real ) ] :Optional :around x-axis[degree]
[-thres[Zscore] thresZscore (1.0 ).as(Real ) ] :Optional :Zscore
[-interp[olationMode]interpMode (0 ).as(Integer ) ] :Optional :interpMode
[-O[utput]V[ector]BILDOutVectorBILD (NULL ).as(outFile::BILD ) ] :Optional :Output:BILD-vector
[-O[utput]V[ector] OutVector (NULL ).as(String ) ] :Optional :Output:vector basename
[-arrow[Shape] ArrowR1 (0.1 ).as(Real )
ArrowR2 (0.4 ).as(Real )
ArrowRho (0.75 ).as(Real ) ] :Optional :ArrowShape
[-zoom[Vector] ZoomVector (1.0 ).as(Real ) ] :Optional :Zoom
[-arrowColorDisk ArrowColorDisk0 (0.0 ).as(Real )
ArrowColorDisk1 (1.0 ).as(Real )
ArrowColorDisk2 (0.0 ).as(Real ) ] :Optional :ArrowColorDisk
[-arrowColorSylinder ArrowColorSylinder0 (1.0 ).as(Real )
ArrowColorSylinder1 (0.0 ).as(Real )
ArrowColorSylinder2 (0.0 ).as(Real ) ] :Optional :ArrowColorSylinder
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
[-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode
----- Additional Usage -----
0: Cylinder with radius and length
1: Disk with radius and length(thickness)
2: Sphere with radius