Last updated on 2024-09-27 11:51:37 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| mvMAPIT | 1 | 4 | 8 |
Current CRAN status: ERROR: 1, NOTE: 4, OK: 8
Version: 2.0.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘mvMAPIT.Rmd’ using rmarkdown
Quitting from lines 52-59 [load_dependencies] (mvMAPIT.Rmd)
Error: processing vignette 'mvMAPIT.Rmd' failed with diagnostics:
there is no package called 'RcppAlgos'
--- failed re-building ‘mvMAPIT.Rmd’
--- re-building ‘study-compare-p-value-combine-methods.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mvMAPIT.Rcheck/vign_test/mvMAPIT/vignettes/study-compare-p-value-combine-methods_files/figure-html/plot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92583 bytes
Input file size = 92793 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65331
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65331
Output IDAT size = 65331 bytes (27252 bytes decrease)
Output file size = 65409 bytes (27384 bytes = 29.51% decrease)
--- finished re-building ‘study-compare-p-value-combine-methods.Rmd’
--- re-building ‘study-phillips-bnabs.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mvMAPIT.Rcheck/vign_test/mvMAPIT/vignettes/study-phillips-bnabs_files/figure-html/manhattan-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 38814 bytes
Input file size = 38940 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28631
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28631
Output IDAT size = 28631 bytes (10183 bytes decrease)
Output file size = 28709 bytes (10231 bytes = 26.27% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mvMAPIT.Rcheck/vign_test/mvMAPIT/vignettes/study-phillips-bnabs_files/figure-html/CR6261-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16290 bytes
Input file size = 16380 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14121
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14121
Output IDAT size = 14121 bytes (2169 bytes decrease)
Output file size = 14199 bytes (2181 bytes = 13.32% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mvMAPIT.Rcheck/vign_test/mvMAPIT/vignettes/study-phillips-bnabs_files/figure-html/CR9114-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20643 bytes
Input file size = 20745 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17075
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17075
Output IDAT size = 17075 bytes (3568 bytes decrease)
Output file size = 17153 bytes (3592 bytes = 17.32% decrease)
--- finished re-building ‘study-phillips-bnabs.Rmd’
--- re-building ‘study-wtccc-mice.Rmd’ using rmarkdown
--- finished re-building ‘study-wtccc-mice.Rmd’
--- re-building ‘tutorial-docker-mvmapit.Rmd’ using rmarkdown
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
--- finished re-building ‘tutorial-docker-mvmapit.Rmd’
--- re-building ‘tutorial-simulations.Rmd’ using rmarkdown
--- finished re-building ‘tutorial-simulations.Rmd’
SUMMARY: processing the following file failed:
‘mvMAPIT.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2.0.3
Check: installed package size
Result: NOTE
installed size is 13.2Mb
sub-directories of 1Mb or more:
libs 11.9Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64