Last updated on 2024-09-27 11:51:28 CEST.
| Package | FAIL | NOTE | OK |
|---|---|---|---|
| ade4 | 13 | ||
| ade4TkGUI | 13 | ||
| adegraphics | 4 | 9 | |
| adephylo | 3 | 10 | |
| adespatial | 13 | ||
| CINID | 13 | ||
| DRomics | 10 | 3 | |
| fitdistrplus | 13 | ||
| Interatrix | 13 | ||
| LDcorSV | 13 | ||
| LifemapR | 13 | ||
| MareyMap | 13 | ||
| Mondrian | 13 | ||
| nlsMicrobio | 13 | ||
| nlstools | 1 | 12 | |
| OnAge | 13 | ||
| phylter | 10 | 3 |
Current CRAN status: NOTE: 13
Version: 1.7-22
Check: Rd files
Result: NOTE
checkRd: (-1) varipart.Rd:19: Lost braces
19 | \item{type}{a character specifying the algorithm which should be used to adjust R-squared (either \code{"simulated"} or \ code{"parametric"}).}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 1.7-22
Check: installed package size
Result: NOTE
installed size is 6.4Mb
sub-directories of 1Mb or more:
R 1.4Mb
data 3.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.7-22
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘sp’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 13
Current CRAN status: NOTE: 4, OK: 9
Version: 1.0-21
Check: installed package size
Result: NOTE
installed size is 5.3Mb
sub-directories of 1Mb or more:
R 2.0Mb
doc 2.7Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: NOTE: 3, OK: 10
Version: 1.1-16
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
abouheif.Rd: phylo4d-class
adephylo-package.Rd: phylo4d-class, phylo4-class
bullseye.Rd: phylo4-class, phylo4d-class
distRoot.Rd: phylo4-class, phylo4d-class
distTips.Rd: phylo4-class, phylo4d-class
listDD.Rd: phylo4-class, phylo4d-class
listTips.Rd: phylo4-class, phylo4d-class
miscUtils.Rd: phylo4-class
orthobasis.Rd: phylo4-class, phylo4d-class
orthogram.Rd: phylo4-class, phylo4d-class
ppca.Rd: phylo4d-class, phylo4-class
proxTips.Rd: phylo4-class, phylo4d-class
sp.tips.Rd: phylo4-class, phylo4d-class
table.phylo4d.Rd: phylo4d-class
treePart.Rd: phylo4-class, phylo4d-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 10, OK: 3
Version: 2.5-2
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
RNAseqdata.Rd: rlog, vst
itemselect.Rd: lmFit, eBayes, topTable, DESeqDataSetFromMatrix,
DESeq, results
microarraydata.Rd: normalizeBetweenArrays
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 2.5-2
Check: installed package size
Result: NOTE
installed size is 6.1Mb
sub-directories of 1Mb or more:
doc 2.9Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: FAIL: 1, OK: 12
Version: 2.1-0
Check: re-building of vignette outputs
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
VO2rest 333.537401 379.980302
VO2peak 1587.155300 1674.611702
mu 1.030255 1.342002
------
Correlation matrix:
VO2rest VO2peak mu
VO2rest 1.00000000 0.07907046 0.1995377
VO2peak 0.07907046 1.00000000 0.7554924
mu 0.19953773 0.75549241 1.0000000
> plotfit(O2K.nls1, smooth = TRUE)
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 4.31 0.24 4.55 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 10, OK: 3
Version: 0.9.11
Check: Rd files
Result: NOTE
checkRd: (-1) phylter.Rd:51: Lost braces; missing escapes or markup?
51 | the output ({out$DiscardedGenes}).}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64