* using log directory 'd:/Rcompile/CRANpkg/local/4.3/tables.Rcheck' * using R version 4.3.3 (2024-02-29 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'tables/DESCRIPTION' ... OK * this is package 'tables' version '0.9.25' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'tables' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [6s] ERROR Running examples in 'tables-Ex.R' failed The error most likely occurred in: > ### Name: matrix_form.tabular > ### Title: Transform tabular object to matrices printable by formatters > ### package > ### Aliases: matrix_form.tabular > > ### ** Examples > > if (requireNamespace("formatters")) { + Sex <- factor(sample(c("Male", "Female"), 100, rep=TRUE)) + Status <- factor(sample(c("low", "medium", "high"), 100, rep=TRUE)) + z <- rnorm(100) + 5 + fmt <- function(x) { + s <- format(x, digits=2) + even <- ((1:length(s)) %% 2) == 0 + s[even] <- sprintf("(%s)", s[even]) + s + } + tab <- tabular( Justify(c)*Heading()*z*Sex*Heading(Statistic)*Format(fmt())*(mean+sd) + ~ Status ) + mform <- matrix_form.tabular(tab) + page <- 1 + cat("Page ", page, " Full table\n\n") + cat(formatters::toString(mform)) + + # This shows automatic pagination, breaking up the + # table by rows + byrow <- formatters::pag_indices_inner(formatters::mf_rinfo(mform), + rlpp = 2, + min_siblings = 1) + for (i in seq_along(byrow)) { + mform2 <- matrix_form.tabular(tab[byrow[[i]], ]) + page <- page + 1 + cat("\nPage ", page, " Rows", byrow[[i]], "\n\n") + cat(formatters::toString(mform2)) + } + + # This gives the breaks by columns, counting the + # row label columns: + bycol <- formatters::vert_pag_indices(mform, cpp = 30, rep_cols = 2) + # Display the table with both kinds of breaks + for (i in seq_along(byrow)) { + rows <- byrow[[i]] + for (j in seq_along(bycol)) { + cols <- bycol[[j]] + cols <- cols[cols > 2] - 2 # cols includes the row labels + mform3 <- matrix_form.tabular(tab[rows, cols, drop = FALSE]) + page <- page + 1 + cat("\nPage ", page, "Rows", rows, "column", cols, "\n\n") + cat(formatters::toString(mform3)) + } + } + } Loading required namespace: formatters Page 1 Full table Status high low medium ———————————————————————————————————————— Female mean 4.85 5.11 5.03 sd (0.80) (1.05) (1.06) Male mean 4.97 4.71 5.33 sd (0.85) (0.87) (1.10) Page 2 Rows 1 2 Status high low medium —————————————————————————————————————— Female mean 4.9 5.1 5.0 sd (0.8) (1.1) (1.1) Page 3 Rows 3 4 Status high low medium —————————————————————————————————————— Male mean 4.97 4.71 5.33 sd (0.85) (0.87) (1.10) Error in formatters::vert_pag_indices(mform, cpp = 30, rep_cols = 2) : argument "fontspec" is missing, with no default Calls: -> matrix_form -> matrix_form Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... [6s] OK 'tables.Rnw'... [5s] OK * checking re-building of vignette outputs ... [52s] OK * checking PDF version of manual ... [24s] OK * checking HTML version of manual ... [6s] OK * DONE Status: 1 ERROR