* using log directory 'd:/Rcompile/CRANpkg/local/4.3/NADIA.Rcheck' * using R version 4.3.3 (2024-02-29 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'NADIA/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'NADIA' version '0.4.2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'NADIA' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [6s] OK * checking whether the package can be loaded with stated dependencies ... [5s] OK * checking whether the package can be unloaded cleanly ... [5s] OK * checking whether the namespace can be loaded with stated dependencies ... [6s] OK * checking whether the namespace can be unloaded cleanly ... [7s] OK * checking loading without being on the library search path ... [7s] OK * checking startup messages can be suppressed ... [6s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [19s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [11s] ERROR Running examples in 'NADIA-Ex.R' failed The error most likely occurred in: > ### Name: PipeOpOOR_B > ### Title: PipeOpOOR_B > ### Aliases: PipeOpOOR_B > > ### ** Examples > > { + + # Using debug learner for example purpose + + graph <- PipeOpOOR_B$new() %>>% LearnerClassifDebug$new() + graph_learner <- GraphLearner$new(graph) + + # Task with NA + set.seed(1) + resample(tsk("pima"), graph_learner, rsmp("cv", folds = 3)) + } Error in initialize(...) : object 'ParamLgl' not found Calls: %>>% ... .__ParamSet__initialize -> assert_list -> checkList -> %and% -> isTRUE Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... [27s] ERROR Running 'testthat.R' [27s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(NADIA) Loading required package: mlr3 Loading required package: mlr3pipelines Loading required package: paradox > > test_check("NADIA") [1] "Error in doTryCatch(return(expr), name, parentenv, handler): No values with no missing values\n" [ FAIL 5 | WARN 0 | SKIP 12 | PASS 47 ] ══ Skipped tests (12) ══════════════════════════════════════════════════════════ • On CRAN (12): 'test_A.R:7:3', 'test_A.R:41:3', 'test_autotune.R:287:3', 'test_autotune.R:303:3', 'test_autotune.R:308:3', 'test_autotune.R:313:3', 'test_autotune.R:318:3', 'test_autotune.R:323:3', 'test_autotune.R:332:3', 'test_autotune.R:345:3', 'test_autotune.R:350:3', 'test_simplePipe.R:29:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_advancePipeline.R:7:3'): Creting PipeLines ───────────────────── Error in `initialize(...)`: object 'ParamUty' not found Backtrace: ▆ 1. ├─testthat::expect_is(PipeOpAmelia$new(), "PipeOpImpute") at test_advancePipeline.R:7:3 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─PipeOpAmelia$new() 5. └─NADIA (local) initialize(...) 6. ├─super$initialize(...) 7. │ └─mlr3pipelines:::.__PipeOpImpute__initialize(...) 8. └─ParamSet$new(...) 9. └─paradox (local) initialize(...) 10. └─paradox:::.__ParamSet__initialize(...) 11. └─checkmate::assert_list(params, types = "Domain") 12. └─checkmate::checkList(...) 13. └─... %and% checkListTypes(x, types) 14. └─base::isTRUE(lhs) ── Error ('test_advancePipeline.R:62:3'): Adavance pipe simple imputation ───── Error in `initialize(...)`: object 'ParamUty' not found Backtrace: ▆ 1. ├─testthat::expect_equal(...) at test_advancePipeline.R:62:3 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─PipeOpAmelia$new() 5. └─NADIA (local) initialize(...) 6. ├─super$initialize(...) 7. │ └─mlr3pipelines:::.__PipeOpImpute__initialize(...) 8. └─ParamSet$new(...) 9. └─paradox (local) initialize(...) 10. └─paradox:::.__ParamSet__initialize(...) 11. └─checkmate::assert_list(params, types = "Domain") 12. └─checkmate::checkList(...) 13. └─... %and% checkListTypes(x, types) 14. └─base::isTRUE(lhs) ── Error ('test_mlworkflow.R:21:1'): (code run outside of `test_that()`) ─────── Error in `initialize(...)`: object 'ParamUty' not found Backtrace: ▆ 1. └─PipeOpAmelia$new(parallel = FALSE) at test_mlworkflow.R:21:1 2. └─NADIA (local) initialize(...) 3. ├─super$initialize(...) 4. │ └─mlr3pipelines:::.__PipeOpImpute__initialize(...) 5. └─ParamSet$new(...) 6. └─paradox (local) initialize(...) 7. └─paradox:::.__ParamSet__initialize(...) 8. └─checkmate::assert_list(params, types = "Domain") 9. └─checkmate::checkList(...) 10. └─... %and% checkListTypes(x, types) 11. └─base::isTRUE(lhs) ── Error ('test_simplePipe.R:21:3'): Creting OOR_B ───────────────────────────── Error in `initialize(...)`: object 'ParamLgl' not found Backtrace: ▆ 1. ├─testthat::expect_is(PipeOpOOR_B$new(), "PipeOpImpute") at test_simplePipe.R:21:3 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─PipeOpOOR_B$new() 5. └─NADIA (local) initialize(...) 6. └─ParamSet$new(...) 7. └─paradox (local) initialize(...) 8. └─paradox:::.__ParamSet__initialize(...) 9. └─checkmate::assert_list(params, types = "Domain") 10. └─checkmate::checkList(...) 11. └─... %and% checkListTypes(x, types) 12. └─base::isTRUE(lhs) ── Error ('test_simulateMissing.R:27:3'): PipeOpSimulatedMissing Tests ───────── Error in `initialize(...)`: object 'ParamDbl' not found Backtrace: ▆ 1. ├─testthat::expect_true(...) at test_simulateMissing.R:27:3 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─PipeOpSimulateMissings$new() 5. └─NADIA (local) initialize(...) 6. └─ParamSet$new(...) 7. └─paradox (local) initialize(...) 8. └─paradox:::.__ParamSet__initialize(...) 9. └─checkmate::assert_list(params, types = "Domain") 10. └─checkmate::checkList(...) 11. └─... %and% checkListTypes(x, types) 12. └─base::isTRUE(lhs) [ FAIL 5 | WARN 0 | SKIP 12 | PASS 47 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [16s] ERROR Error(s) in re-building vignettes: --- re-building 'Errors_Statistic_and_Handling.Rmd' using rmarkdown Quitting from lines 96-105 [Lrn] (Errors_Statistic_and_Handling.Rmd) Error: processing vignette 'Errors_Statistic_and_Handling.Rmd' failed with diagnostics: object 'ParamDbl' not found --- failed re-building 'Errors_Statistic_and_Handling.Rmd' --- re-building 'NADIA_examples_and_motivation.Rmd' using rmarkdown Quitting from lines 116-132 [chunk1] (NADIA_examples_and_motivation.Rmd) Error: processing vignette 'NADIA_examples_and_motivation.Rmd' failed with diagnostics: object 'ParamDbl' not found --- failed re-building 'NADIA_examples_and_motivation.Rmd' SUMMARY: processing the following files failed: 'Errors_Statistic_and_Handling.Rmd' 'NADIA_examples_and_motivation.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [25s] OK * checking HTML version of manual ... [9s] OK * DONE Status: 3 ERRORs