SomaticCancerAlterations

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see SomaticCancerAlterations.

Somatic Cancer Alterations


Bioconductor version: 3.15

Collection of somatic cancer alteration datasets

Author: Julian Gehring

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("SomaticCancerAlterations")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SomaticCancerAlterations")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SomaticCancerAlterations")
SomaticCancerAlterations - HTML HTML R Script
Reference Manual PDF

Details

biocViews CancerData, ExperimentData, Genome, NCI, Project1000genomes
Version 1.32.0
License GPL-3
Depends R (>= 3.5.0)
Imports GenomicRanges, IRanges, S4Vectors
System Requirements
URL
See More
Suggests testthat, ggbio, ggplot2, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me SomaticSignatures
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SomaticCancerAlterations_1.32.0.tar.gz
Windows Binary
macOS Binary (x86_64)
Source Repository git clone https://git.bioconductor.org/packages/SomaticCancerAlterations
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SomaticCancerAlterations
Package Short Url https://bioconductor.org/packages/SomaticCancerAlterations/
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