Overview

The material in my parts of the course requires R version 3.2 and Bioconductor version 3.2

stopifnot(
    getRversion() >= '3.2' && getRversion() < '3.3',
    BiocInstaller::biocVersion() == "3.2"
)

1. Introduction to R / Bioconductor (T)
2. Working with Data: SummarizedExperiment (P)
3. Genomic Ranges and other Data Structures For Genome-Scale Data And Annotation (P)
4. Adding Annotation To Your Analysis (P)
5. Counting Reads And Working With Large Files (P)
6. RNA-Seq Differential Expression (P)
7. ChIP-Seq For Understanding Gene Regulation (P)
8. Motifs (P)
9. Visualizing Genomic Data (P)

(T): Talk; (P): Practical.