Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-03-24 11:59:39 -0400 (Sun, 24 Mar 2019).
Package 723/1685 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||
Harman 1.11.0 Jason Ross
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | ||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK |
Package: Harman |
Version: 1.11.0 |
Command: rm -rf Harman.buildbin-libdir && mkdir Harman.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Harman.buildbin-libdir Harman_1.11.0.tar.gz |
StartedAt: 2019-03-24 08:06:15 -0400 (Sun, 24 Mar 2019) |
EndedAt: 2019-03-24 08:08:21 -0400 (Sun, 24 Mar 2019) |
EllapsedTime: 125.7 seconds |
RetCode: 0 |
Status: OK |
PackageFile: Harman_1.11.0.zip |
PackageFileSize: 1.278 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Harman.buildbin-libdir && mkdir Harman.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Harman.buildbin-libdir Harman_1.11.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'Harman' ... ** libs C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -D_ARRAYALIGNEMT=4 -D_USE_RCPP=1 -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -IC:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include -std=c++0x -O2 -Wall -mtune=generic -c Harman.cpp -o Harman.o C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o Harman.dll tmp.def Harman.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/Harman.buildbin-libdir/00LOCK-Harman/00new/Harman/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Harman' finding HTML links ... done arrowPlot html callHarman html detachHarman html harman html harmanScores html harmanresults html pcaPlot html plot.harmanresults html prcompPlot html print.summary.harmanresults html reconstructData html shiftBetas html summary.harmanresults html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Harman' ... ** libs C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -D_ARRAYALIGNEMT=4 -D_USE_RCPP=1 -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -IC:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include -std=c++0x -O2 -Wall -mtune=generic -c Harman.cpp -o Harman.o In file included from Harman.cpp:182:0: CSelectRandom.h: In instantiation of 'std::vector<unsigned int>* CSelectRandom<T>::ReturnVectOf32bitIntegersInRange_CSTDLIB(size_t, size_t, size_t, size_t) [with T = double; size_t = long long unsigned int]': Harman.cpp:1764:117: required from here CSelectRandom.h:943:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (currval < howManyIN) ^ C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o Harman.dll tmp.def Harman.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/Harman.buildbin-libdir/Harman/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'Harman' as Harman_1.11.0.zip * DONE (Harman)