############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL mosbi ### ############################################################################## ############################################################################## * installing to library ‘/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library’ * installing *source* package ‘mosbi’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’ using C++17 g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c attr_graph.cpp -o attr_graph.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c attributeConnector.cpp -o attributeConnector.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c attribute_overlap.cpp -o attribute_overlap.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c bicluster_methods.cpp -o bicluster_methods.o bicluster_methods.cpp: In function ‘int is_subset_or_identical(Rcpp::S4&, Rcpp::S4&)’: bicluster_methods.cpp:130:18: warning: loop variable ‘i’ of type ‘const int&’ binds to a temporary constructed from type ‘Rcpp::traits::storage_type<14>::type’ {aka ‘double’} [-Wrange-loop-construct] 130 | for(const int& i : row1){ | ^ bicluster_methods.cpp:130:18: note: use non-reference type ‘const int’ to make the copy explicit or ‘const Rcpp::traits::storage_type<14>::type&’ {aka ‘const double&’} to prevent copying bicluster_methods.cpp:137:18: warning: loop variable ‘j’ of type ‘const int&’ binds to a temporary constructed from type ‘Rcpp::traits::storage_type<14>::type’ {aka ‘double’} [-Wrange-loop-construct] 137 | for(const int& j : col1){ | ^ bicluster_methods.cpp:137:18: note: use non-reference type ‘const int’ to make the copy explicit or ‘const Rcpp::traits::storage_type<14>::type&’ {aka ‘const double&’} to prevent copying g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c boost_graph.cpp -o boost_graph.o In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/scoped_ptr.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:22, from boost_graph.cpp:2: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | explicit scoped_ptr( std::auto_ptr p ) BOOST_SP_NOEXCEPT : px( p.release() ) | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/opt_storage.hpp:11, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/archive_constructed.hpp:12, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/serialize_container.hpp:14, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/serialize_fca_container.hpp:12, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/unordered_set.hpp:17, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered_set.hpp:17, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:20: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/arg.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/placeholders.hpp:24, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_categories.hpp:16, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/graph_traits.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:24: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:18, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/property_map/vector_property_map.hpp:14, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/property_map/property_map.hpp:598, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:27: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 361 | explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 508 | explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 521 | shared_ptr( std::auto_ptr && r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 604 | shared_ptr & operator=( std::auto_ptr & r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 613 | shared_ptr & operator=( std::auto_ptr && r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr& boost::shared_ptr::operator=(std::auto_ptr<_Up>&&)’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 615 | this_type( static_cast< std::auto_ptr && >( r ) ).swap( *this ); | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/bind/mem_fn.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mem_fn.hpp:22, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/detail/prologue.hpp:19, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/function_template.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/detail/maybe_include.hpp:36, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/function3.hpp:11, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/property_map/dynamic_property_map.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/graphviz.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/graphml.hpp:20, from boost_graph.cpp:3: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/get_pointer.hpp: At global scope: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c boost_write.cpp -o boost_write.o In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/scoped_ptr.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:22, from boost_write.cpp:2: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | explicit scoped_ptr( std::auto_ptr p ) BOOST_SP_NOEXCEPT : px( p.release() ) | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/opt_storage.hpp:11, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/archive_constructed.hpp:12, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/serialize_container.hpp:14, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/detail/serialize_fca_container.hpp:12, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered/unordered_set.hpp:17, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/unordered_set.hpp:17, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:20: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/arg.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/placeholders.hpp:24, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_categories.hpp:16, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/graph_traits.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:24: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:18, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/property_map/vector_property_map.hpp:14, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/property_map/property_map.hpp:598, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/adjacency_list.hpp:27: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 361 | explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 508 | explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 521 | shared_ptr( std::auto_ptr && r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 604 | shared_ptr & operator=( std::auto_ptr & r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 613 | shared_ptr & operator=( std::auto_ptr && r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr& boost::shared_ptr::operator=(std::auto_ptr<_Up>&&)’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 615 | this_type( static_cast< std::auto_ptr && >( r ) ).swap( *this ); | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/bind/mem_fn.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mem_fn.hpp:22, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/detail/prologue.hpp:19, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/function_template.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/detail/maybe_include.hpp:36, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/function3.hpp:11, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/property_map/dynamic_property_map.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/graphviz.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/graph/graphml.hpp:20, from boost_write.cpp:3: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/get_pointer.hpp: At global scope: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c distance_matrix.cpp -o distance_matrix.o distance_matrix.cpp: In member function ‘virtual void SimWorker::operator()(std::size_t, std::size_t)’: distance_matrix.cpp:244:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 244 | for(int i=begin;i 0) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c extractBF.cpp -o extractBF.o In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/arg.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/placeholders.hpp:24, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_categories.hpp:16, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:27, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19, from extractBF.cpp:3: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/bind/mem_fn.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mem_fn.hpp:22, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/detail/prologue.hpp:19, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function.hpp:30, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:24, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:27, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:16, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:23: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/function_base.hpp:34, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/detail/prologue.hpp:18: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ extractBF.cpp: In function ‘Rcpp::S4 getBFCluster(Rcpp::String, int)’: extractBF.cpp:92:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 92 | for(int i=0; i::failed() [with Model = boost::algorithm::FinderConcept >, __gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:26: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept::constraints() [with FinderT = boost::algorithm::detail::token_finderF >; IteratorT = __gnu_cxx::__normal_iterator >]’ 40 | void constraints() | ^~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:31: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept > > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range<__gnu_cxx::__normal_iterator > >; SinglePassRange2 = boost::iterator_range<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from ‘bool boost::operator==(const iterator_range&, const iterator_range&) [with Iterator1T = __gnu_cxx::__normal_iterator >; Iterator2T = __gnu_cxx::__normal_iterator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from ‘bool boost::algorithm::split_iterator::equal(const boost::algorithm::split_iterator&) const [with IteratorT = __gnu_cxx::__normal_iterator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from ‘static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; Facade2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; mpl_::true_ = mpl_::bool_]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator==(const iterator_facade&, const iterator_facade&) [with Derived1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; V1 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >; TC1 = forward_traversal_tag; Reference1 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >&; Difference1 = long int; Derived2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; V2 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >; TC2 = forward_traversal_tag; Reference2 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >&; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator > >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = getBFCluster(Rcpp::String, int)::]’ extractBF.cpp:79:21: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator > >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c extractQUBIC2.cpp -o extractQUBIC2.o In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/arg.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/placeholders.hpp:24, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_categories.hpp:16, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:27, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19, from extractQUBIC2.cpp:7: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/bind/mem_fn.hpp:25, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/mem_fn.hpp:22, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function/detail/prologue.hpp:19, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/function.hpp:30, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:24, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:27, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:16, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:23: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ In file included from /usr/include/c++/13/bits/shared_ptr_base.h:59, from /usr/include/c++/13/bits/shared_ptr.h:53, from /usr/include/c++/13/regex:49, from extractQUBIC2.cpp:5: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:20, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/size.hpp:21, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/functions.hpp:20, from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::constraint::failed() [with Model = boost::algorithm::FinderConcept >, __gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:26: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept::constraints() [with FinderT = boost::algorithm::detail::token_finderF >; IteratorT = __gnu_cxx::__normal_iterator >]’ 40 | void constraints() | ^~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::constraint::failed() [with Model = boost::algorithm::FinderConcept >, __gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_cond(std::string&, int&)::]’ extractQUBIC2.cpp:55:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept::constraints() [with FinderT = boost::algorithm::detail::token_finderF >; IteratorT = __gnu_cxx::__normal_iterator >]’ 40 | void constraints() | ^~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:31: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > > >)>’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept > > >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range<__gnu_cxx::__normal_iterator > >; SinglePassRange2 = boost::iterator_range<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from ‘bool boost::operator==(const iterator_range&, const iterator_range&) [with Iterator1T = __gnu_cxx::__normal_iterator >; Iterator2T = __gnu_cxx::__normal_iterator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from ‘bool boost::algorithm::split_iterator::equal(const boost::algorithm::split_iterator&) const [with IteratorT = __gnu_cxx::__normal_iterator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from ‘static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; Facade2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; mpl_::true_ = mpl_::bool_]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator==(const iterator_facade&, const iterator_facade&) [with Derived1 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; V1 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >; TC1 = forward_traversal_tag; Reference1 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >&; Difference1 = long int; Derived2 = boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >; V2 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >; TC2 = forward_traversal_tag; Reference2 = const boost::iterator_range<__gnu_cxx::__normal_iterator > >&; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator > >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept<__gnu_cxx::__normal_iterator > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = __gnu_cxx::__normal_iterator >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept > > >]’: /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept > > >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > > > >::value’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > > > >’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, __gnu_cxx::__normal_iterator > >, boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator > >, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = std::__cxx11::basic_string&; PredicateT = extract_gene(std::string&, int&)::]’ extractQUBIC2.cpp:29:17: required from here /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range<__gnu_cxx::__normal_iterator > >]’ 37 | ~model() | ^ /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c full_graph.cpp -o full_graph.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c misc.cpp -o misc.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c network_edge_strength.cpp -o network_edge_strength.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c sample_biclusters.cpp -o sample_biclusters.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I'/media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -c write_matrix.cpp -o write_matrix.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.20-bioc/R/lib -L/usr/local/lib -o mosbi.so RcppExports.o attr_graph.o attributeConnector.o attribute_overlap.o bicluster_methods.o boost_graph.o boost_write.o distance_matrix.o extractBF.o extractQUBIC2.o full_graph.o misc.o network_edge_strength.o sample_biclusters.o write_matrix.o -L/home/biocbuild/bbs-3.20-bioc/R/lib -lR installing to /media/volume/teran2_disk/biocbuild/bbs-3.20-bioc/R/site-library/00LOCK-mosbi/00new/mosbi/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mosbi)