############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data fgsea ### ############################################################################## ############################################################################## * checking for file ‘fgsea/DESCRIPTION’ ... OK * preparing ‘fgsea’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘fgsea-tutorial.Rmd’ using rmarkdown 2024-08-15 16:35:47.766 R[55097:47315281] XType: com.apple.fonts is not accessible. 2024-08-15 16:35:47.767 R[55097:47315281] XType: XTFontStaticRegistry is enabled. --- finished re-building ‘fgsea-tutorial.Rmd’ --- re-building ‘geseca-tutorial.Rmd’ using rmarkdown Quitting from lines 91-113 [unnamed-chunk-4] (geseca-tutorial.Rmd) Error: processing vignette 'geseca-tutorial.Rmd' failed with diagnostics: Timeout was reached: [ftp.ncbi.nlm.nih.gov] Resolving timed out after 10016 milliseconds --- failed re-building ‘geseca-tutorial.Rmd’ SUMMARY: processing the following file failed: ‘geseca-tutorial.Rmd’ Error: Vignette re-building failed. Execution halted