############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data cBioPortalData ### ############################################################################## ############################################################################## * checking for file ‘cBioPortalData/DESCRIPTION’ ... OK * preparing ‘cBioPortalData’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘cBioPortalData.Rmd’ using rmarkdown Quitting from lines 89-92 [unnamed-chunk-3] (cBioPortalData.Rmd) Error: processing vignette 'cBioPortalData.Rmd' failed with diagnostics: Timeout was reached: [www.cbioportal.org] Resolving timed out after 10029 milliseconds --- failed re-building ‘cBioPortalData.Rmd’ --- re-building ‘cBioPortalDataErrors.Rmd’ using rmarkdown --- finished re-building ‘cBioPortalDataErrors.Rmd’ --- re-building ‘cBioPortalRClient.Rmd’ using rmarkdown Quitting from lines 74-75 [unnamed-chunk-2] (cBioPortalRClient.Rmd) Error: processing vignette 'cBioPortalRClient.Rmd' failed with diagnostics: Timeout was reached: [www.cbioportal.org] Resolving timed out after 10145 milliseconds --- failed re-building ‘cBioPortalRClient.Rmd’ --- re-building ‘cgdsrMigration.Rmd’ using rmarkdown Quitting from lines 42-48 [unnamed-chunk-2] (cgdsrMigration.Rmd) Error: processing vignette 'cgdsrMigration.Rmd' failed with diagnostics: Timeout was reached: [www.cbioportal.org] Resolving timed out after 10107 milliseconds --- failed re-building ‘cgdsrMigration.Rmd’ SUMMARY: processing the following files failed: ‘cBioPortalData.Rmd’ ‘cBioPortalRClient.Rmd’ ‘cgdsrMigration.Rmd’ Error: Vignette re-building failed. Execution halted