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###
### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SPONGE
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* checking for file ‘SPONGE/DESCRIPTION’ ... OK
* preparing ‘SPONGE’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘SPONGE.Rmd’ using rmarkdown
2024-08-15 18:05:52.489 R[14622:48775474] XType: com.apple.fonts is not accessible.
2024-08-15 18:05:52.489 R[14622:48775474] XType: XTFontStaticRegistry is enabled.
Warning: The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "SPONGE vignette", and the latter is "Sparse Partial correlation ON Gene Expression with SPONGE". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check.
Could not fetch https://raw.githubusercontent.com/mlist/SPONGE/master/vignettes/sponge_logo.png
HttpExceptionRequest Request {
  host                 = "raw.githubusercontent.com"
  port                 = 443
  secure               = True
  requestHeaders       = []
  path                 = "/mlist/SPONGE/master/vignettes/sponge_logo.png"
  queryString          = ""
  method               = "GET"
  proxy                = Nothing
  rawBody              = False
  redirectCount        = 10
  responseTimeout      = ResponseTimeoutDefault
  requestVersion       = HTTP/1.1
}
 (ConnectionFailure Network.Socket.getAddrInfo (called with preferred socket type/protocol: AddrInfo {addrFlags = [AI_ADDRCONFIG], addrFamily = AF_UNSPEC, addrSocketType = Stream, addrProtocol = 6, addrAddress = <assumed to be undefined>, addrCanonName = <assumed to be undefined>}, host name: Just "raw.githubusercontent.com", service name: Just "443"): does not exist (nodename nor servname provided, or not known))
Error: processing vignette 'SPONGE.Rmd' failed with diagnostics:
pandoc document conversion failed with error 61
--- failed re-building ‘SPONGE.Rmd’

--- re-building ‘spongEffects.Rmd’ using rmarkdown

Quitting from lines 265-272 [unnamed-chunk-25] (spongEffects.Rmd)
Error: processing vignette 'spongEffects.Rmd' failed with diagnostics:
Failed to perform HTTP request.
Caused by error in `curl::curl_fetch_memory()`:
! Could not resolve host: www.ensembl.org
--- failed re-building ‘spongEffects.Rmd’

SUMMARY: processing the following files failed:
  ‘SPONGE.Rmd’ ‘spongEffects.Rmd’

Error: Vignette re-building failed.
Execution halted