############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data universalmotif ### ############################################################################## ############################################################################## * checking for file ‘universalmotif/DESCRIPTION’ ... OK * preparing ‘universalmotif’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Introduction.Rmd’ using rmarkdown --- finished re-building ‘Introduction.Rmd’ --- re-building ‘IntroductionToSequenceMotifs.Rmd’ using rmarkdown --- finished re-building ‘IntroductionToSequenceMotifs.Rmd’ --- re-building ‘MotifComparisonAndPvalues.Rmd’ using rmarkdown Quitting from lines 18-28 (MotifComparisonAndPvalues.Rmd) Error: processing vignette 'MotifComparisonAndPvalues.Rmd' failed with diagnostics: there is no package called 'MotifDb' --- failed re-building ‘MotifComparisonAndPvalues.Rmd’ --- re-building ‘MotifManipulation.Rmd’ using rmarkdown Quitting from lines 19-25 (MotifManipulation.Rmd) Error: processing vignette 'MotifManipulation.Rmd' failed with diagnostics: there is no package called 'MotifDb' --- failed re-building ‘MotifManipulation.Rmd’ --- re-building ‘SequenceSearches.Rmd’ using rmarkdown Quitting from lines 19-27 (SequenceSearches.Rmd) Error: processing vignette 'SequenceSearches.Rmd' failed with diagnostics: there is no package called 'ggbio' --- failed re-building ‘SequenceSearches.Rmd’ SUMMARY: processing the following files failed: ‘MotifComparisonAndPvalues.Rmd’ ‘MotifManipulation.Rmd’ ‘SequenceSearches.Rmd’ Error: Vignette re-building failed. Execution halted