############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r hipathia -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data hipathia ### ############################################################################## ############################################################################## * checking for file 'hipathia/DESCRIPTION' ... OK * preparing 'hipathia': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'hipathia-vignette.Rmd' using rmarkdown !!! Error: Cannot call ghostscript `mgs' (No such file or directory/The system cannot find the file specified)! pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. !!! Error: Cannot call ghostscript `mgs' (No such file or directory/The system cannot find the file specified)! pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. !!! Error: Cannot call ghostscript `mgs' (No such file or directory/The system cannot find the file specified)! pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. !!! Error: Cannot call ghostscript `mgs' (No such file or directory/The system cannot find the file specified)! pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. !!! Error: Cannot call ghostscript `mgs' (No such file or directory/The system cannot find the file specified)! pdfcrop: major issue: So far, you have not checked for updates as a MiKTeX user. Quitting from lines 327-328 (hipathia-vignette.Rmd) Error: processing vignette 'hipathia-vignette.Rmd' failed with diagnostics: failed to load resource name: AH69111 title: meta_graph_info_hsa_v2.rda reason: error in evaluating the argument 'x' in selecting a method for function 'get': bad restore file magic number (file may be corrupted) -- no data loaded --- failed re-building 'hipathia-vignette.Rmd' SUMMARY: processing the following file failed: 'hipathia-vignette.Rmd' Error: Vignette re-building failed. Execution halted