############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL netSmooth ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'netSmooth' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'netSmooth' finding HTML links ... done calc2DEntropy html clusterExperimentWorkflow html clusterOne html dimReduce html human.ppi html l1NormalizeColumns html l1NormalizeRows html mouse.ppi html netSmooth html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-netSmooth/00new/netSmooth/help/netSmooth+2CMatrix-method.html pickDimReduction html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-netSmooth/00new/netSmooth/help/pickDimReduction+2CMatrix-method.html projectFromNetworkRecombine-matrix-method html projectOnNetwork html randomWalkByIterations html randomWalkByMatrixInv-matrix-method html randomWalkBySolve-matrix-method html robustClusters html scoreSmoothing html smallPPI html smallscRNAseq html smoothAndRecombine-matrix-method html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netSmooth) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'groHMM' is missing or broken done