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###
### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ndexr
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'ndexr' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ndexr'
    finding HTML links ... done
    listToRCode                             html  
    ndex_conf_header                        html  
    ndex_config                             html  
    ndex_connect                            html  
    ndex_create_group                       html  
    ndex_create_network                     html  
    ndex_create_user                        html  
    ndex_delete_group                       html  
    ndex_delete_network                     html  
    ndex_delete_user                        html  
    ndex_find_groups                        html  
    ndex_find_networks                      html  
    ndex_find_user_byId                     html  
    ndex_find_user_byName                   html  
    ndex_find_users                         html  
    ndex_get_group                          html  
    ndex_get_network                        html  
    ndex_group_delete_membership            html  
    ndex_group_list_networks                html  
    ndex_group_list_users                   html  
    ndex_group_network_get_permission       html  
    ndex_group_set_membership               html  
    ndex_helper_encodeParams                html  
    ndex_helper_getApi                      html  
    ndex_helper_httpResponseHandler         html  
    ndex_internal_addAspects                html  
    ndex_network_aspect_get_metadata        html  
    ndex_network_delete_permission          html  
    ndex_network_get_aspect                 html  
    ndex_network_get_metadata               html  
    ndex_network_get_permission             html  
    ndex_network_get_provenance             html  
    ndex_network_get_summary                html  
    ndex_network_set_systemProperties       html  
    ndex_network_update_aspect              html  
    ndex_network_update_permission          html  
    ndex_network_update_profile             html  
    ndex_rest_DELETE                        html  
    ndex_rest_GET                           html  
    ndex_rest_POST                          html  
    ndex_rest_PUT                           html  
    ndex_update_group                       html  
    ndex_update_network                     html  
    ndex_update_user                        html  
    ndex_user_change_password               html  
    ndex_user_forgot_password               html  
    ndex_user_get_networksummary            html  
    ndex_user_get_showcase                  html  
    ndex_user_list_groups                   html  
    ndex_user_list_permissions              html  
    ndex_user_mail_password                 html  
    ndex_user_show_group                    html  
    ndex_user_show_permission               html  
    ndex_verify_user                        html  
    ndexr-package                           html  
    ngraph_toRCX                            html  
    print.NDExConnection                    html  
    print.RCX                               html  
    rcx_asNewNetwork                        html  
    rcx_aspect_toJSON                       html  
    rcx_fromJSON                            html  
    rcx_new                                 html  
    rcx_toJSON                              html  
    rcx_toNGraph                            html  
    rcx_toRCXgraph                          html  
    rcx_updateMetaData                      html  
    rcxgraph_toRCX                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ndexr)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'TBSignatureProfiler' is missing or broken
 done