############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL iSEEu ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'iSEEu' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'iSEEu' finding HTML links ... done AggregatedDotPlot html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-iSEEu/00new/iSEEu/help/.refineParameters+2CAggregatedDotPlot-method.html finding level-2 HTML links ... done DynamicMarkerTable-class html DynamicReducedDimensionPlot-class html FeatureSetTable-class html GeneSetTable-class html LogFCLogFCPlot-class html MAPlot-class html MarkdownBoard-class html ReducedDimensionHexPlot-class html VolcanoPlot-class html createGeneSetCommands html defunct html global-FeatureSetCommands html global-TableExtraFields html globals-PValuePattern html iSEEu-pkg html modeEmpty html modeGating html modeReducedDim html registerDEFields html registerFeatureSetCollections html utils-geneset html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iSEEu) Making 'packages.html' ... done