############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL hopach ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'hopach' ... ** using staged installation ** libs "C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c Rdistances.c -o Rdistances.o "C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c hdist.c -o hdist.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o hopach.dll tmp.def Rdistances.o hdist.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-hopach/00new/hopach/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function from function 'as.hdist' in package 'hopach' ** help *** installing help indices converting help for package 'hopach' finding HTML links ... done boot2fuzzy html bootplot html bootstrap html correlationordering html disscosangle html distancematrix html dplot html golub html hdist-class html hopach html hopach.internal html hopach2tree html labelstomss html makeoutput html prune html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hopach) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'pkgDepTools' is missing or broken done