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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:hca.install-out.txt --library=D:\biocbuild\bbs-3.15-bioc\R\library --no-vignettes --timings hca_1.3.2.tar.gz
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* using log directory 'D:/biocbuild/bbs-3.15-bioc/meat/hca.Rcheck'
* using R Under development (unstable) (2021-11-21 r81221)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'hca/DESCRIPTION' ... OK
* this is package 'hca' version '1.3.2'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'hca' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... OK
* checking examples ... ERROR
Running examples in 'hca-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: bundles
> ### Title: HCA Bundle Querying
> ### Aliases: bundles bundles_facets bundles_default_columns bundles_detail
> 
> ### ** Examples
> 
> title <- paste(
+     "Tabula Muris: Transcriptomic characterization of 20 organs and",
+     "tissues from Mus musculus at single cell resolution"
+ )
> filters <- filters( projectTitle = list(is = title) )
> bundles(filters = filters)
# A tibble: 0 x 6
# ... with 6 variables: projectTitle <chr>, genusSpecies <chr>, samples <chr>,
#   files <chr>, bundleUuid <chr>, bundleVersion <chr>
> 
> bundles_facets()
Error in .lol_valid_path(x, path) : 'path' not in 'x':
  path: 'organ.terms[*].term'
Calls: bundles_facets ... lapply -> FUN -> lol_lpull -> stopifnot -> .lol_valid_path
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 ERROR
Running the tests in 'tests/testthat.R' failed.
Last 13 lines of output:
  `expected`: TRUE 
  -- Failure (test_manifest.R:17:5): 'manifest()' works with specific filter criteria --
  nrow(test_manifest) > 0L is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  -- Failure (test_samples.R:4:5): 'samples()' works with small size and default arguments --
  nrow(test_samples) > 0L is not TRUE
  
  `actual`:   FALSE
  `expected`: TRUE 
  
  [ FAIL 4 | WARN 0 | SKIP 1 | PASS 151 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 ERRORs
See
  'D:/biocbuild/bbs-3.15-bioc/meat/hca.Rcheck/00check.log'
for details.