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### Running command:
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###   rm -rf flagme.buildbin-libdir && mkdir flagme.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=flagme.buildbin-libdir flagme_1.51.2.tar.gz
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* installing *source* package 'flagme' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c dp.c -o dp.o
dp.c: In function 'dp':
dp.c:263:26: warning: 'cur_min' may be used uninitialized in this function [-Wmaybe-uninitialized]
    D[(i+1)+(j+1)*(nr+1)] = cur_min;
    ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
dp.c:264:28: warning: 'tb' may be used uninitialized in this function [-Wmaybe-uninitialized]
    phi[(i+1)+(j+1)*(nr+1)] = tb;
    ~~~~~~~~~~~~~~~~~~~~~~~~^~~~
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c init.c -o init.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c pearson.c -o pearson.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o flagme.dll tmp.def dp.o init.o pearson.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/meat/flagme.buildbin-libdir/00LOCK-flagme/00new/flagme/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'flagme'
    finding HTML links ... done
    addAMDISPeaks                           html  
    addChromaTOFPeaks                       html  
    addXCMSPeaks                            html  
    finding level-2 HTML links ... done

    betweenAlignment                        html  
    calcTimeDiffs                           html  
    clusterAlignment                        html  
    compress-peaksAlignment-method          html  
    compress-progressiveAlignment-method    html  
    corPrt                                  html  
    de_Duper                                html  
    decompress-peaksAlignment-method        html  
    decompress-progressiveAlignment-method
                                            html  
    distToLib                               html  
    dp                                      html  
    dynRT                                   html  
    eitherMatrix-class                      html  
    exportSpectra                           html  
    gatherInfo                              html  
    headToTailPlot                          html  
    importSpec                              html  
    imputePeaks                             html  
    matchSpec                               html  
    multipleAlignment-class                 html  
    ndpRT                                   html  
    normDotProduct                          html  
    parseChromaTOF                          html  
    parseELU                                html  
    peaksAlignment-class                    html  
    peaksDataset                            html  
    plotAlignedFrags                        html  
    plotAlignment-peaksAlignment-method     html  
    plotChrom-peaksDataset-method           html  
    plotClustAlignment-clusterAlignment-method
                                            html  
    plotFrags                               html  
    plotImage                               html  
    progressiveAlignment-class              html  
    retFatMatrix                            html  
    rmaFitUnit                              html  
    show-multipleAlignment-method           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'flagme' as flagme_1.51.2.zip
* DONE (flagme)