############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf comapr.buildbin-libdir && mkdir comapr.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=comapr.buildbin-libdir comapr_0.99.43.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'comapr' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'comapr' finding HTML links ... done bootstrapDist html calGeneticDist html coCount html comapr html combineHapState html correctGT html countBinState html countCOs html countGT html dot-change_missing html dot-filterCOsExtra html dot-label_gt html fill_fail html filterGT html findDupSamples html getAFTracks html getCellAFTrack html getCellCORange html getCellDPTrack html getDistortedMarkers html getMeanDPTrack html getSNPDensityTrack html parents_geno html perCellChrQC html perSegChrQC html permuteDist html plotCount html plotGTFreq html plotGeneticDist html plotWholeGenome html readColMM html readHapState html snp_geno html snp_geno_gr html twoSamples html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'comapr' as comapr_0.99.43.zip * DONE (comapr)