############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL STATegRa ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'STATegRa' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'STATegRa' finding HTML links ... done STATegRa-defunct html STATegRa html STATegRaUsersGuide html STATegRa_data html STATegRa_data_TCGA_BRCA html bioDist html bioDistFeature html bioDistFeaturePlot html bioDistW html bioDistWPlot html bioDistclass html bioMap html caClass-class html combiningMappings html createOmicsExpressionSet html getInitialData html getLoadings html getMethodInfo html getPreprocessing html getScores html getVAF html holistOmics html modelSelection html finding level-2 HTML links ... done omicsCompAnalysis html omicsNPC html plotRes html plotVAF html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (STATegRa) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'derfinderHelper' is missing or broken done