############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ProteoMM ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'ProteoMM' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ProteoMM' finding HTML links ... done MBimpute html convert_log2 html eig_norm1 html eig_norm2 html eigen_pi html g.test html get_presAbs_prots html hs_peptides html makeLMFormula html make_intencities html make_meta html mm_peptides html peptideLevel_DE html peptideLevel_PresAbsDE html plot_1prot html plot_3_pep_trends_NOfile html plot_volcano html plot_volcano_wLab html prot_level_multiMat_PresAbs html prot_level_multi_part html subset_proteins html sva.id html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ProteoMM) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'pairkat' is missing or broken done