############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL Motif2Site ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'Motif2Site' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Motif2Site' finding HTML links ... done Bed2Granges html CompareBeds2GivenRegions html CompareMotifs2GivenRegions html DeleteMultipleFiles html DetectBindingSites html DetectBindingSitesBed html DetectBindingSitesMotif html DetectFdrCutoffBH html Motif2Site html NegativeBinomialTestWithReplicate html combine2Table html combineMotifFiles html combineTestResults html compareBedFiless2UserProvidedRegions html compareMotifs2UserProvidedRegions html computeFoldEnrichment html data html decomposeBindingSignal html deriveHeuristicBindingDistribution html findMotifs html fitKernelDensity html generate1ntBedAlignment html motifBindingNegativeBinomialCount html motifChipCount html motifCount html motifTablePreProcess html pairwisDifferential html quiet html recenterBindingSitesAcrossExperiments html removeNonBellShapedMotifs html strongestMotif html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Motif2Site) Making 'packages.html' ... done