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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL MSstatsLiP
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'MSstatsLiP' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c model_adjustment.cpp -o model_adjustment.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o MSstatsLiP.dll tmp.def RcppExports.o model_adjustment.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-MSstatsLiP/00new/MSstatsLiP/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MSstatsLiP'
    finding HTML links ... done
    BarcodePlotLiP                          html  
    LiPRawData                              html  
    MSstatsLiP                              html  
    MSstatsLiP_Summarized                   html  
    MSstatsLiP_data                         html  
    MSstatsLiP_model                        html  
    PCAPlotLiP                              html  
    SkylineTest                             html  
    SkylinetoMSstatsLiPFormat               html  
    SpectronauttoMSstatsLiPFormat           html  
    TrPRawData                              html  
    annotSite                               html  
    calculateTrypticity                     html  
    correlationPlotLiP                      html  
    dataProcessPlotsLiP                     html  
    dataSummarizationLiP                    html  
    groupComparisonLiP                      html  
    groupComparisonPlotsLiP                 html  
    locateMod                               html  
    locatePTM                               html  
    tidyFasta                               html  
    trypticHistogramLiP                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MSstatsLiP)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'FunChIP' is missing or broken
 done