############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL KEGGlincs ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'KEGGlincs' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'KEGGlincs' finding HTML links ... done KEGG_lincs html KEGGlincs html KL_compare html add_edge_data html cyto_vis html edge_mapping_info html expand_KEGG_edges html expand_KEGG_mappings html generate_mappings html get_KGML html get_fisher_info html get_graph_object html keggerize_edges html node_mapping_info html overlap_info html path_genes_by_cell_type html refine_mappings html tidy_edge html toCytoscape html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (KEGGlincs) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'marr' is missing or broken done