############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL BSgenome ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'BSgenome' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BSgenome' finding HTML links ... done BSParams-class html finding level-2 HTML links ... done BSgenome-class html BSgenome-utils html BSgenomeForge html BSgenomeViews-class html SNPlocs-class html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-BSgenome/00new/BSgenome/help/snplocs.html XtraSNPlocs-class html available.genomes html bsapply html export-methods html getSeq-methods html injectSNPs html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BSgenome) Making 'packages.html' ... done