############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL AMOUNTAIN ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'AMOUNTAIN' ... ** using staged installation ** libs "C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I/src/include -I/x64/include -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c AMOUNTAIN.c -o AMOUNTAIN.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o AMOUNTAIN.dll tmp.def AMOUNTAIN.o -L/x64/lib -lgsl -lgslcblas -lm -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-AMOUNTAIN/00new/AMOUNTAIN/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'AMOUNTAIN' finding HTML links ... done CGPFixSS html CGPFixSSMultiLayer html CGPFixSSTwolayer html EuclideanProjectionENNORM html moduleIdentificationGPFixSS html moduleIdentificationGPFixSSMultilayer html moduleIdentificationGPFixSSTwolayer html multilayernetworkSimulation html networkSimulation html twolayernetworkSimulation html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AMOUNTAIN) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'fdrame' is missing or broken done