############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/recount_1.20.0.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL recount_1.20.0.zip && rm recount_1.20.0.tar.gz recount_1.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 11 5805k 11 674k 0 0 668k 0 0:00:08 0:00:01 0:00:07 669k 39 5805k 39 2276k 0 0 1132k 0 0:00:05 0:00:02 0:00:03 1133k 82 5805k 82 4776k 0 0 1586k 0 0:00:03 0:00:03 --:--:-- 1587k 100 5805k 100 5805k 0 0 1751k 0 0:00:03 0:00:03 --:--:-- 1751k install for i386 * installing *source* package 'recount' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'recount' finding HTML links ... done abstract_search html add_metadata html add_predictions html all_metadata html browse_study html coverage_matrix html download_retry html download_study html expressed_regions html find_geo html geo_characteristics html geo_info html getRPKM html getTPM html read_counts html recount-package html recount_abstract html recount_exons html recount_genes html recount_url html reproduce_ranges html rse_gene_SRP009615 html scale_counts html snaptron_query html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'recount' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'recount' as recount_1.20.0.zip * DONE (recount) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'recount' successfully unpacked and MD5 sums checked