############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/nearBynding_1.4.0.tar.gz && rm -rf nearBynding.buildbin-libdir && mkdir nearBynding.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nearBynding.buildbin-libdir nearBynding_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL nearBynding_1.4.0.zip && rm nearBynding_1.4.0.tar.gz nearBynding_1.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 5 2944k 5 175k 0 0 515k 0 0:00:05 --:--:-- 0:00:05 515k 47 2944k 47 1405k 0 0 1041k 0 0:00:02 0:00:01 0:00:01 1040k 100 2944k 100 2944k 0 0 1408k 0 0:00:02 0:00:02 --:--:-- 1408k install for i386 * installing *source* package 'nearBynding' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nearBynding' finding HTML links ... done CleanBAMtoBG html CleanBEDtoBG html ExtractTranscriptomeSequence html GenomeMappingToChainFile html assessGrouping html bindingContextDistance html bindingContextDistanceCapR html getChainChrSize html get_outfiles html liftOverToExomicBG html nearBynding-package html processCapRout html runCapR html runStereogene html runStereogeneOnCapR html symmetryCapR html symmetryContext html visualizeCapRStereogene html visualizeStereogene html write_config html write_fasta html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'nearBynding' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'nearBynding' as nearBynding_1.4.0.zip * DONE (nearBynding) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'nearBynding' successfully unpacked and MD5 sums checked