############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/genomeIntervals_1.50.0.tar.gz && rm -rf genomeIntervals.buildbin-libdir && mkdir genomeIntervals.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=genomeIntervals.buildbin-libdir genomeIntervals_1.50.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL genomeIntervals_1.50.0.zip && rm genomeIntervals_1.50.0.tar.gz genomeIntervals_1.50.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 41 38804 41 15991 0 0 130k 0 --:--:-- --:--:-- --:--:-- 131k 100 38804 100 38804 0 0 316k 0 --:--:-- --:--:-- --:--:-- 315k install for i386 * installing *source* package 'genomeIntervals' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'genomeIntervals' finding HTML links ... done GenomeIntervals-constructor html Genome_intervals-class html finding level-2 HTML links ... done Genome_intervals-coercion-methods html Genome_intervals-deprecated html Genome_intervals-ordering html Genome_intervals_stranded-class html c.Genome_intervals html core_annotated html distance_to_nearest-methods html gen_ints html genomeIntervals-package html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/genomeIntervals.buildbin-libdir/00LOCK-genomeIntervals/00new/genomeIntervals/help/genomeIntervals.html genomeIntervals-readGff3 html getGffAttribute html interval_overlap-methods html interval_set_operations-methods html parseGffAttributes html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'genomeIntervals' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'genomeIntervals' as genomeIntervals_1.50.0.zip * DONE (genomeIntervals) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'genomeIntervals' successfully unpacked and MD5 sums checked