##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/derfinder_1.28.0.tar.gz && rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=derfinder.buildbin-libdir derfinder_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL derfinder_1.28.0.zip && rm derfinder_1.28.0.tar.gz derfinder_1.28.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  255k  100  255k    0     0   843k      0 --:--:-- --:--:-- --:--:--  847k

install for i386

* installing *source* package 'derfinder' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'derfinder'
    finding HTML links ... done
    analyzeChr                              html  
    annotateRegions                         html  
    calculatePvalues                        html  
    calculateStats                          html  
    coerceGR                                html  
    collapseFullCoverage                    html  
    coverageToExon                          html  
    createBw                                html  
    createBwSample                          html  
    define_cluster                          html  
    derfinder-deprecated                    html  
    derfinder-package                       html  
    extendedMapSeqlevels                    html  
    filterData                              html  
    findRegions                             html  
    fullCoverage                            html  
    genomeData                              html  
    genomeDataRaw                           html  
    genomeFstats                            html  
    genomeInfo                              html  
    genomeRegions                           html  
    genomicState                            html  
    getRegionCoverage                       html  
    getTotalMapped                          html  
    loadCoverage                            html  
    makeGenomicState                        html  
    makeModels                              html  
    mergeResults                            html  
    preprocessCoverage                      html  
    railMatrix                              html  
    rawFiles                                html  
    regionMatrix                            html  
    sampleDepth                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'derfinder' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'derfinder' as derfinder_1.28.0.zip
* DONE (derfinder)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'derfinder' successfully unpacked and MD5 sums checked