############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf celaref.buildbin-libdir && mkdir celaref.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=celaref.buildbin-libdir celaref_1.12.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'celaref' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'celaref' finding HTML links ... done contrast_each_group_to_the_rest html contrast_each_group_to_the_rest_for_norm_ma_with_limma html contrast_the_group_to_the_rest html contrast_the_group_to_the_rest_with_limma_for_microarray html convert_se_gene_ids html de_table.demo_query html de_table.demo_ref html demo_cell_info_table html demo_counts_matrix html demo_gene_info_table html demo_microarray_expr html demo_microarray_sample_sheet html demo_query_se html demo_ref_se html find_within_match_differences html get_counts_index html get_inner_or_outer_ci html get_limma_top_table_with_ci html get_matched_stepped_mwtest_res_table html get_ranking_and_test_results html get_rankstat_table html get_reciprocal_matches html get_stepped_pvals_str html get_the_up_genes_for_all_possible_groups html get_the_up_genes_for_group html get_vs_random_pval html load_dataset_10Xdata html load_se_from_tables html make_ranking_violin_plot html make_ref_similarity_names html make_ref_similarity_names_for_group html run_pair_test_stats html subset_cells_by_group html subset_se_cells_for_group_test html trim_small_groups_and_low_expression_genes html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'celaref' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'celaref' as celaref_1.12.0.zip * DONE (celaref)