############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf bluster.buildbin-libdir && mkdir bluster.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bluster.buildbin-libdir bluster_1.4.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'bluster' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_snn.cpp -o build_snn.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sum_neighbor_weights.cpp -o sum_neighbor_weights.o C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o bluster.dll tmp.def RcppExports.o build_snn.o sum_neighbor_weights.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/bluster.buildbin-libdir/00LOCK-bluster/00new/bluster/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'bluster' finding HTML links ... done AffinityParam-class html AgnesParam-class html BlusterParam-class html ClaraParam-class html DbscanParam-class html finding level-2 HTML links ... done DianaParam-class html FixedNumberParam-class html HclustParam-class html HierarchicalParam-class html KmeansParam-class html MbkmeansParam-class html NNGraphParam-class html PamParam-class html SomParam-class html TwoStepParam-class html approxSilhouette html bluster-package html bootstrapStability html clusterRMSD html clusterRows html clusterSweep html compareClusterings html defaultArguments html linkClusters html makeSNNGraph html mergeCommunities html neighborPurity html nestedClusters html pairwiseModularity html pairwiseRand html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'bluster' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c build_snn.cpp -o build_snn.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sum_neighbor_weights.cpp -o sum_neighbor_weights.o C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o bluster.dll tmp.def RcppExports.o build_snn.o sum_neighbor_weights.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/bluster.buildbin-libdir/bluster/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'bluster' as bluster_1.4.0.zip * DONE (bluster)