############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SummarizedBenchmark_2.12.0.tar.gz && rm -rf SummarizedBenchmark.buildbin-libdir && mkdir SummarizedBenchmark.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SummarizedBenchmark.buildbin-libdir SummarizedBenchmark_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SummarizedBenchmark_2.12.0.zip && rm SummarizedBenchmark_2.12.0.tar.gz SummarizedBenchmark_2.12.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 18 5645k 18 1051k 0 0 1087k 0 0:00:05 --:--:-- 0:00:05 1087k 54 5645k 54 3059k 0 0 1558k 0 0:00:03 0:00:01 0:00:02 1558k 100 5645k 100 5645k 0 0 1979k 0 0:00:02 0:00:02 --:--:-- 1980k install for i386 * installing *source* package 'SummarizedBenchmark' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SummarizedBenchmark' finding HTML links ... done BDData-class html BDData-setter html BDData-show html BDData html BDMethod-class html BDMethod-setter html BDMethod-show html BDMethod html BDMethodList-class html BDMethodList-setter html BDMethodList-show html BDMethodList html BenchDesign-class html BenchDesign-show html BenchDesign html SummarizedBenchmark-class html finding level-2 HTML links ... done SummarizedBenchmark html addMethod html addPerformanceMetric html allSB html assayNames-setter html availableMetrics html buildBench html compareBDData html compareBDMethod html compareBenchDesigns html dropMethod html estimateMetrics html expandMethod html groundTruths-setter html groundTruths html hashBDData html mcols-setter html modifyMethod html modmethod html performanceMetrics-setter html performanceMetrics html plotMethodsOverlap html plotROC html printMethod html sb html tdat html tidyBDMethod html tidyUpMetrics html updateBench html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SummarizedBenchmark' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'SummarizedBenchmark' as SummarizedBenchmark_2.12.0.zip * DONE (SummarizedBenchmark) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'SummarizedBenchmark' successfully unpacked and MD5 sums checked