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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/HiTC_1.38.0.tar.gz && rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiTC.buildbin-libdir HiTC_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL HiTC_1.38.0.zip && rm HiTC_1.38.0.tar.gz HiTC_1.38.0.zip
###
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100  725k  100  725k    0     0   590k      0  0:00:01  0:00:01 --:--:--  589k

install for i386

* installing *source* package 'HiTC' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'HiTC'
    finding HTML links ... done
    CQC                                     html  
    HTCexp-class                            html  
    HTClist-class                           html  
    HiTC-internal                           html  
    Nora_5C                                 html  
    binningC                                html  
    directionalityIndex                     html  
    discretize                              html  
    export.my5C                             html  
    exportC                                 html  
    extractRegion                           html  
    getAnnotatedRestrictionSites            html  
    getExpectedCounts                       html  
    getPearsonMap                           html  
    getRestrictionFragmentsPerChromosome    html  
    import.my5C                             html  
    importC                                 html  
    intervalsDist                           html  
    mapC                                    html  
    normICE                                 html  
    normLGF                                 html  
    pca.hic                                 html  
    removeIntervals                         html  
    setGenomicFeatures                      html  
    setIntervalScale                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'HiTC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HiTC' as HiTC_1.38.0.zip
* DONE (HiTC)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'HiTC' successfully unpacked and MD5 sums checked