############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf CNORfuzzy.buildbin-libdir && mkdir CNORfuzzy.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CNORfuzzy_1.36.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R CNORfuzzy.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=CNORfuzzy.buildbin-libdir CNORfuzzy_1.36.0.tar.gz' >>>>>>> * installing *source* package ‘CNORfuzzy’ ... ** using staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c simulatorT1.c -o simulatorT1.o simulatorT1.c:320:28: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] if((track_cond == nCond)) { ~~~~~~~~~~~^~~~~~~~ simulatorT1.c:320:28: note: remove extraneous parentheses around the comparison to silence this warning if((track_cond == nCond)) { ~ ^ ~ simulatorT1.c:320:28: note: use '=' to turn this equality comparison into an assignment if((track_cond == nCond)) { ^~ = 1 warning generated. clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CNORfuzzy.so simulatorT1.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.14-bioc/meat/CNORfuzzy.buildbin-libdir/00LOCK-CNORfuzzy/00new/CNORfuzzy/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CNORfuzzy) >>>>>>> >>>>>>> FIXING LINKS FOR CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgcc_s.1.dylib" "CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so" install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgfortran.5.dylib" "CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libquadmath.0.dylib" "CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so"