############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CGHbase_1.54.0.tar.gz && rm -rf CGHbase.buildbin-libdir && mkdir CGHbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CGHbase.buildbin-libdir CGHbase_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CGHbase_1.54.0.zip && rm CGHbase_1.54.0.tar.gz CGHbase_1.54.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 56 849k 56 478k 0 0 674k 0 0:00:01 --:--:-- 0:00:01 674k 100 849k 100 849k 0 0 843k 0 0:00:01 0:00:01 --:--:-- 843k install for i386 * installing *source* package 'CGHbase' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CGHbase' finding HTML links ... done CGHbase-package html Wilting html WiltingCalled html WiltingNorm html WiltingRaw html WiltingRegions html WiltingSeg html avedist html chromosomes html class.cghCall html class.cghRaw html class.cghRegions html class.cghSeg html copynumber html frequencyPlot html frequencyPlotCalls html make_cghRaw html plot html probloss html regions html summaryPlot html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CGHbase' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'CGHbase' as CGHbase_1.54.0.zip * DONE (CGHbase) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'CGHbase' successfully unpacked and MD5 sums checked