############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BDMMAcorrect_1.12.0.tar.gz && rm -rf BDMMAcorrect.buildbin-libdir && mkdir BDMMAcorrect.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BDMMAcorrect.buildbin-libdir BDMMAcorrect_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BDMMAcorrect_1.12.0.zip && rm BDMMAcorrect_1.12.0.tar.gz BDMMAcorrect_1.12.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 95 371k 95 353k 0 0 853k 0 --:--:-- --:--:-- --:--:-- 852k 100 371k 100 371k 0 0 496k 0 --:--:-- --:--:-- --:--:-- 496k install for i386 * installing *source* package 'BDMMAcorrect' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppArmadillo/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I"C:/extsoft/include" -DARMA_DONT_USE_OPENMP -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MCMC_algorithm.cpp -o MCMC_algorithm.o In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct is_arithmetic<__m128> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct is_arithmetic<__m128i> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct is_arithmetic<__m128d> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:101:22: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:101:22: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:59:34: required from 'class Eigen::RefBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:193:76: required from 'class Eigen::Ref >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:694:17: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppArmadillo/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I"C:/extsoft/include" -DARMA_DONT_USE_OPENMP -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct is_arithmetic<__m128> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct is_arithmetic<__m128i> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct is_arithmetic<__m128d> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:101:22: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:101:22: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:59:34: required from 'class Eigen::RefBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Ref.h:193:76: required from 'class Eigen::Ref >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:694:17: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o BDMMAcorrect.dll tmp.def MCMC_algorithm.o RcppExports.o -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -O2 -msse2 -mfpmath=sse -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/BDMMAcorrect.buildbin-libdir/00LOCK-BDMMAcorrect/00new/BDMMAcorrect/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BDMMAcorrect' finding HTML links ... done BDMMA html L_mean html Microbiome_dat html VBatch html fdr_cut html trace_plot html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'BDMMAcorrect' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppArmadillo/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I"C:/extsoft/include" -DARMA_DONT_USE_OPENMP -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MCMC_algorithm.cpp -o MCMC_algorithm.o In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct is_arithmetic<__m128> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct is_arithmetic<__m128i> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct is_arithmetic<__m128d> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from MCMC_algorithm.cpp:3: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppArmadillo/include' -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I"C:/extsoft/include" -DARMA_DONT_USE_OPENMP -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct is_arithmetic<__m128> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct is_arithmetic<__m128i> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct is_arithmetic<__m128d> { enum { value = true }; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] struct palign_impl ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__vector(2) long long int'} [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__vector(4) float'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__vector(2) double'} [-Wignored-attributes] template<> struct conj_helper { \ ^ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__vector(4) float'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(4) float'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__vector(2) double'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) double'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30, from C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:5: C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here C:/Users/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__vector(2) long long int'} [-Wignored-attributes] C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o BDMMAcorrect.dll tmp.def MCMC_algorithm.o RcppExports.o -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -O2 -msse2 -mfpmath=sse -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/BDMMAcorrect.buildbin-libdir/BDMMAcorrect/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'BDMMAcorrect' as BDMMAcorrect_1.12.0.zip * DONE (BDMMAcorrect) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'BDMMAcorrect' successfully unpacked and MD5 sums checked