############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/variancePartition_1.22.0.tar.gz && rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=variancePartition.buildbin-libdir variancePartition_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL variancePartition_1.22.0.zip && rm variancePartition_1.22.0.tar.gz variancePartition_1.22.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1394k 100 1394k 0 0 2628k 0 --:--:-- --:--:-- --:--:-- 2631k install for i386 * installing *source* package 'variancePartition' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'classifyTestsF' in package 'variancePartition' ** help *** installing help indices converting help for package 'variancePartition' finding HTML links ... done ESS-method html FMT-class html FMT html FMT.ZI html MArrayLM2-class html VarParCIList-class html VarParFitList-class html as.data.frame-varPartResults-method html as.matrix-varPartResults-method html calcVarPart-method html canCorPairs html classifyTestsF-MArrayLM2-method html classifyTestsF html colinearityScore html dot-getAllUniContrasts html dot-isMixedModelFormula html dot-standard_transform html dream-method html eBayes-method html eBayesFMT html extractVarPart html fitExtractVarPartModel-method html fitVarPartModel-method html getContrast-method html get_prediction-method html ggColorHue html plotCompareP-method html plotContrasts html plotCorrMatrix html plotCorrStructure html plotPercentBars html plotStratify html plotStratifyBy html plotVarPart-method html residuals-MArrayLM-method html residuals-MArrayLM2-method html residuals-VarParFitList-method html sortCols-method html subset.MArrayLM2-method html toptable-method html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/variancePartition.buildbin-libdir/00LOCK-variancePartition/00new/variancePartition/help/toptable+2CFMT-method.html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/variancePartition.buildbin-libdir/00LOCK-variancePartition/00new/variancePartition/help/toptable+2CMArrayLM2-method.html varParFrac-class html varPartConfInf html varPartDEdata html varPartData html varPartResults-class html voomWithDreamWeights html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'variancePartition' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'variancePartition' as variancePartition_1.22.0.zip * DONE (variancePartition) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'variancePartition' successfully unpacked and MD5 sums checked