############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/simplifyEnrichment_1.2.0.tar.gz && rm -rf simplifyEnrichment.buildbin-libdir && mkdir simplifyEnrichment.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=simplifyEnrichment.buildbin-libdir simplifyEnrichment_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL simplifyEnrichment_1.2.0.zip && rm simplifyEnrichment_1.2.0.tar.gz simplifyEnrichment_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 12 16.7M 12 2068k 0 0 2156k 0 0:00:07 --:--:-- 0:00:07 2156k 30 16.7M 30 5256k 0 0 2671k 0 0:00:06 0:00:01 0:00:05 2672k 54 16.7M 54 9397k 0 0 3182k 0 0:00:05 0:00:02 0:00:03 3182k 83 16.7M 83 14.0M 0 0 3652k 0 0:00:04 0:00:03 0:00:01 3652k 100 16.7M 100 16.7M 0 0 3872k 0 0:00:04 0:00:04 --:--:-- 3873k install for i386 * installing *source* package 'simplifyEnrichment' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'simplifyEnrichment' finding HTML links ... done DO_similarity html GO_similarity html all_clustering_methods html anno_word_cloud html anno_word_cloud_from_GO html binary_cut html cluster_by_MCL html cluster_by_apcluster html cluster_by_dynamicTreeCut html cluster_by_hdbscan html cluster_by_igraph html cluster_by_kmeans html cluster_by_mclust html cluster_terms html cmp_make_clusters html cmp_make_plot html compare_clustering_methods html count_word html count_word_from_GO html dend_node_apply html difference_score html edit_node html export_to_shiny_app html guess_ont html heightDetails.word_cloud html ht_clusters html partition_by_hclust html partition_by_kmeans html partition_by_kmeanspp html partition_by_pam html plot_binary_cut html random_DO html random_GO html register_clustering_methods html remove_clustering_methods html reset_clustering_methods html scale_fontsize html select_cutoff html simplifyEnrichment html simplifyGO html simplifyGOFromMultipleLists html subset_enrichResult html term_similarity html term_similarity_from_KEGG html term_similarity_from_MSigDB html term_similarity_from_Reactome html term_similarity_from_enrichResult html term_similarity_from_gmt html widthDetails.word_cloud html word_cloud_grob html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'simplifyEnrichment' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'simplifyEnrichment' as simplifyEnrichment_1.2.0.zip * DONE (simplifyEnrichment) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'simplifyEnrichment' successfully unpacked and MD5 sums checked